Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRNEVLLNGDINFKEVRCVGDNGEVYGIISSKEALKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGENHAKNED |
4OY4 Chain:A ((350-385)) | -ARNDITMEGDTFYNKVRFYGTNFPANGPVMQKKTLKWMPSWTRSSRRKWNKT------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4OY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4707 for 133 contacts (35.4/contact) +
2D Compatibility (PS) -3880 + (NN) -1142 + (LL) 11116
1D Compatibility (HY) -1200 + (ID) 600
Total energy: 9001.0 ( 67.68 by residue)
QMean score : 0.015
|
|
|