Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRTEVN----KRLEAMKEEERQ-KYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYREEGLDLHDCACEGPFHDHEKKGQKGKKPSHHKH |
4Q9K Chain:A ((878-931)) | ------------------------QALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22549 for 243 contacts (92.8/contact) +
2D Compatibility (PS) -5409 + (NN) -3988 + (LL) 1888
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 10590.0 ( 43.58 by residue)
QMean score : 0.303
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