Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRRENTIYVSLWYYIATYVGIAVMYIFNNLSIPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPKESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYST--VPDWVQTLSSVFSVVLILPSWGTAINMLLTM---------RGQWHQLKESPLIKFLVLASTFYMLSTLEGS----IQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTY--QFIDTVK-ALIPY-YNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMAR |
| 3S3D Chain:A ((235-508)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WWTGHPIVYFWLLPA-YAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTW-KMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPIS-----DAQRRLGLAVVWLWFLGMMIMAV--GLHWAGLLNVPRRAYIAQVPDAYPHAAVPMVFNV--LAGIVLLVALLLFIYGLFSVLLSR---ERKPELAEAPLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187132 for 1944 contacts (-96.3/contact) +
2D Compatibility (PS) -25047 + (NN) 3549 + (LL) 19652
1D Compatibility (HY) -24400 + (ID) 3400
Total energy: -216778.0 ( -111.51 by residue)
QMean score : 0.235
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