Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKNFWPLGIMSVLIFGLGIVVFLVVFALKNSPKNDLVYFKGHNEVDLNFNAMLKTYENFKSNYRFSVGLKPLTESPKTPILPYFSKGTHGDKKIQENLLNNALILEKSNTLYAQLQPLKPALDSPNIQVYLAFYPSQSQPRLLGTLDCKNACEPLKFDLLEGDKVGRYKILFKFVFKNKEELILEQLAFFK |
| 2JEK Chain:A ((31-61)) | GRKRGHWMWFVFP-QLRGLGSSPLAVRYGISSLEEAQAYLQHDLLGPRLHECTGLVNQVQGRSIEEIFGPPDDLKLCSSMTLFARATDANQDFVALLAKYYGGGEDRRTVALLAVT----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22496 for 142 contacts (-158.4/contact) +
2D Compatibility (PS) -2966 + (NN) 791 + (LL) 3864
1D Compatibility (HY) -400 + (ID) 250
Total energy: -21457.0 ( -151.11 by residue)
QMean score : 0.434
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