Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSK-EG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYNSFKLLNEGFESLRLPIIKAGLQRIATTPIELND-EQMELTEKLLDRIEDDDDVVALYTNIE |
| 1LFP Chain:A ((5-239)) | --SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTKH-GGNLGASGCVSYLFERKGYIEVPAKE-----VSEEELLEKAIEVGAEDVQPGEEVHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 72703 for 1755 contacts (41.4/contact) +
2D Compatibility (PS) -24637 + (NN) -7836 + (LL) 612
1D Compatibility (HY) 10000 + (ID) 1900
Total energy: 48942.0 ( 27.89 by residue)
QMean score : 0.177
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