Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELSCKRFSSIFDHLNMLIEQ-------------FARIEQLASKNYGSNKEKFLMSDLIDKIEKML-----------LIDEDKKSPIHVSSSNYIIEADFELFAIALKNMIDNAIKYS---------------DDKQVFLDFIGNNLVVSNKSKPLKEDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 4JAU Chain:A ((10-226)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LERLKRIDRMKTEFIANISHELRTPLTVIKGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLER---KSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEA----YI---DPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAK--DRIFEQFYR--VDS---------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59822 for 963 contacts (-62.1/contact) +
2D Compatibility (PS) -18006 + (NN) -5163 + (LL) 19796
1D Compatibility (HY) -12400 + (ID) 2550
Total energy: -78145.0 ( -81.15 by residue)
QMean score : 0.461
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