Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLEKIQKEWLSNIQKDLLSGFVVGLSVI-----PETAGFAIMVGLDVGVAFYTTFYMAFVLSLFGARKAMISAAAGSVALILVGVVKNYGLEYAGVATLMAGILQILLGYLKIGNLLKFIPQSVMYGFVNALGILLLTEQFKFLQNQNLGVFVLLAIGILIIYLFPLITKKIPSNLICILAVSAIALIFDTHAPNLGSIEQGVSGFHFIIIPKNLDFKMVLGLLPYALSLALVGTIESLLTAKTLDVILKDGVSDKNKETKAQGLGNIISGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAVVAVMVIISFTTFNFQSIMNIKTIKLYDTLNMLLVVAVVLYTHNLAIGVVVG--VLINALWIKFKGMG |
| 1A6Q Chain:A ((2-368)) | GAFLDKPKMEKHNAQGQG--NGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSAGA-PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGD-SRGLLCRNRKVHFFTQ---DHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP------EVHDIERSEEDDQFIILACDGIWDV---MGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDN--------MSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIK----GVPDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -360909 for 3070 contacts (-117.6/contact) +
2D Compatibility (PS) -36807 + (NN) -766 + (LL) 2880
1D Compatibility (HY) 400 + (ID) 2500
Total energy: -397702.0 ( -129.54 by residue)
QMean score : 0.225
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