Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFDFFKNKGSAATATDRLKLILAKERT-LNLPYMEE-MRKEIIAVIQKYTKSSDIH-FKTLDGN-QSVETIEVEIILPK
3R9J Chain:C ((2-71))
----------NTANIAKERLQNIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLP-
General information:
TITO was launched using:
RESULT:
Template:
3R9J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5435 for 286 contacts (19.0/contact) +
2D Compatibility (PS) -7064 + (NN) -615 + (LL) 788
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -6006.0 ( -21.00 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_3R9J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9J-query.scw
PDB file :
Tito_Scwrl_3R9J.pdb
: