Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MYFKILATSFSLFLNSWLKRSKLS------------SVPFLSKRQISKSVQAIKIDANNKAIK--------YPPSVDNTVHNRMLSGSLNFNTENTNPKKN---------PTTTEKWIKF--- |
| 4YMR Chain:A ((11-144)) | VLPELRRAQSLTCTGLYREALALWANAWQLQTQLGTPSGPDRPLLTLAGLAVCHQELEDPGEARACSEKALQLLGDKRPHPFLAPFLEAHVRLSWRLGLDKRQSEAQLQALQEAGLTSTPPPSLKELLIKEVLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16283 for 491 contacts (33.2/contact) +
2D Compatibility (PS) -9174 + (NN) 198 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 650
Total energy: 4257.0 ( 8.67 by residue)
QMean score : 0.213
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