Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPGLHHQEKLLNQCMLSQALKAMGDAELRVFL------ASVHDDLKGYEEFLSLCQKPHILALSKIDTATHKQVLQKLQEYQKYSSQF--LALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIEEERIDKVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD |
| 3PR1 Chain:A ((24-192)) | -----GEVAFVGRSNVGKSSLLNALFN-------------RSINFYLV--------NSKYYFVDLPGY--KERMLWKRLVEDYFKNRWSLQM-VFLLVDGRIPPQDSDLMMVEWMKSL-NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLLK--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88208 for 976 contacts (-90.4/contact) +
2D Compatibility (PS) -15152 + (NN) -5453 + (LL) 12872
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -111491.0 ( -114.23 by residue)
QMean score : 0.598
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