Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKVVWVLKNNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGK-TTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEAYDF-YNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIKHR |
| 4KSR Chain:A ((162-276)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDG-IGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHL-VMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60706 for 794 contacts (-76.5/contact) +
2D Compatibility (PS) -12045 + (NN) -3179 + (LL) 11680
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -72500.0 ( -91.31 by residue)
QMean score : 0.421
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