Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSNNMRKLFSMIANSKDKKEKLIESLQENELLNTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPPLKLFVMTDEEVNFYANLKTIEQYNDYVRDLLMKFDLEKYMEEKGVQNA------------------------------------------ |
| 3HM6 Chain:X ((72-638)) | IPFLDYKVYAERIFFPGHSPLHRDLGVPESRRPTVEQGLGQLSNLLNSKLFLTKFIHTLETQRTFSARDRAYVASLLTVALHGKLEYFTDILRTLLSDLVAQYVAKNPKLMLRRTETVVEKLLTNWMSICLYTFVRDSVGEPLYMLFRGIKHQVDKGPVDSVTGKAKYTLNDNRLLREDVEYRPLTLNALLAAQGVPVKVLDCDTISQAKEKMLDQLYKGVPLTQRPDPRTLDVEWRSGVAGHLILSDEDVTSEVQGLWRRLNTLQHYKVPDGATVALVPCGGIRPWHLVKPSIPEIYLTRLLSMKGTLQKFVDDLFQVIL---STSRPVPLAVKYFFDLLDEQAQQHGISDQDTIHIWKTNSLPLR--------------------FWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLADSPINKLLYARDIPRYKRMVE-----RYYADIRQTVPASDQEMNSVLAELSWNYSGDLGARVALHELYKYINKYYDQIITALEEDGTAQKMQLGYRLQQIAAAVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7217 for 999 contacts (-7.2/contact) +
2D Compatibility (PS) -17538 + (NN) 1549 + (LL) 2248
1D Compatibility (HY) 9200 + (ID) 600
Total energy: -12358.0 ( -12.37 by residue)
QMean score : 0.105
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