Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIIYLILFLIVIYLLYRILDVLEQK
3DL8 Chain:E ((59-68))
-----GALFLVLALLLSVI-------
General information:
TITO was launched using:
RESULT:
Template:
3DL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5059 for 30 contacts (-168.6/contact) +
2D Compatibility (PS) -962 + (NN) 527 + (LL) 1400
1D Compatibility (HY) -1600 + (ID) 0
Total energy: -5694.0 ( -189.80 by residue)
QMean score : 1.023
(partial model without unconserved sides chains):
PDB file :
Tito_3DL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL8-query.scw
PDB file :
Tito_Scwrl_3DL8.pdb
: