Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNRGVVLLDGQALAYNIEKDLKNKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACQRVGMDFDLKTLKENITEAELLSLIKDYNTDQNISGILVQLPLPRSIDTKMILEAIDPNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHIEIKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTKNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLNDGRIVGDVDFINAQKIAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF |
| 3NGL Chain:A ((3-273)) | -------ILRGEEIA---EKKAEN-LHGIIERSGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGIAVDLEKY-DDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYYKDVDALSPYNQGLIALNREFLVPATPRAVIDIMDYYGYH--ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINYVND-KVVGDANFEDLSEYVEAITPVPGGVGPITATNILENVVKAAEFQKNNL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192077 for 2303 contacts (-83.4/contact) +
2D Compatibility (PS) -29539 + (NN) -14337 + (LL) 840
1D Compatibility (HY) -24000 + (ID) 5150
Total energy: -264263.0 ( -114.75 by residue)
QMean score : 0.573
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