Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELTQNKNSALQKAMQEKGVENSDKSPDAKMPEDIYCKQITLESMLETTDAFQASCIAIALKSKIRDFDKIPIQTFKPLQEKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALAKSNATQSNAQTFFILGINEILHKKTSKALKYFERSEAVVKDDDFSKDRAIFWQYLASKKKKTLEHLSQSPALNLYSLYASRKLKTTPSYRIISHIQNLSQENPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNTDERAMA---------YAIARQESFLLPALISRSFALGLMQIMPFNVG-PFAKSLGMDN-VDLNDMFNPNIALKFGNYYLNHLK----------KEFNHPLFVAYAYNAGPGFLRRWLESSKRFKGKNHFEPWLSMELMPYSETRMYGFRVMLNYLIYQEIFGNFIPIDAFLEQTLNSKDKP |
| 4HJZ Chain:A ((35-154)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVQRAMQWMPISQKAGAAWGVDPQLITAIIAIQSGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLEHVARNHPAPQAPRYIYKLEQALDAM-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58369 for 708 contacts (-82.4/contact) +
2D Compatibility (PS) -9987 + (NN) -254 + (LL) 30408
1D Compatibility (HY) -2400 + (ID) 1550
Total energy: -42152.0 ( -59.54 by residue)
QMean score : 0.261
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