Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAKMKDIYLDVEKSIKDLQSIFKNADGRDEKLKRFNQEALEVFQKLERESLKELESLKNNEEWENFTIAFYGETGAGKSTLIECLRMFFKEQSKVDQQERFKR--LYSTYQYNHQNFILLDVPGIEGSEKKVIDQISNATQKAHAIFMLPKRLILRKKEKKGKGERLKKSKNSLIRKQRYGRFSTNRLIAQEP |
4DCU Chain:A ((181-253)) | -------------------------------------------------EHFKNIPETKYNEEVIQFCL--IGRPNVGKSSLVNA--MLGEERVIVSN------DAVDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIVVNKWDAVDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24246 for 341 contacts (-71.1/contact) +
2D Compatibility (PS) -6771 + (NN) -698 + (LL) 5408
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -32957.0 ( -96.65 by residue)
QMean score : 0.374
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