Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPDVLLDSFKIALVKKDSKLAFSLIERLSLEQIKSLDLDALLSLKEMIAQSIELLEKEKEELQSQMHKAKQIQKFLS
2RME Chain:A ((1-38))
---------------------------------PPISLDLTHLLR---------EVLEARAEQLAQQEHSKRKLEII--
General information:
TITO was launched using:
RESULT:
Template:
2RME.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4396 for 127 contacts (34.6/contact) +
2D Compatibility (PS) -3323 + (NN) 1879 + (LL) 4104
1D Compatibility (HY) -2800 + (ID) 650
Total energy: 3606.0 ( 28.39 by residue)
QMean score : 0.160
(partial model without unconserved sides chains):
PDB file :
Tito_2RME.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RME-query.scw
PDB file :
Tito_Scwrl_2RME.pdb
: