Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLVKKIGVVIMILVCFLACSQESFIKMQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPIEERNAFFQLTKDEDNSFNPENSVILLNEPSDNSEKNLLSYPNDPNNNEDNANNSQKNPFLYKPKRKTKNPKLIEYSQQDFYPLKNGDIIMSKEGDQWLIEIQSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQIKGKISSYVYTTNNGSLSLRPFYESFLLEKKSDNVYTIENKALDTMEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES |
| 2KNR Chain:A ((1-118)) | --------------------------------------------------MRLKSEMFVSALIRRVFAAGGFAAVEKKGAEAA----GAIFVRQRLRDGRENLYGPAPQSFADDEDIMRAERRFETRLAGVEGEEIAALLERERRF-------------DSDLWVVEIETDEIGTLLTLVDQPQA--------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 37952 for 854 contacts (44.4/contact) +
2D Compatibility (PS) -12644 + (NN) -5358 + (LL) 12804
1D Compatibility (HY) -4000 + (ID) 700
Total energy: 28054.0 ( 32.85 by residue)
QMean score : 0.322
|
|
|