Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKAEFID-LVKKAGKYNSKREAEEAINAFTLAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
4DKY Chain:A ((1-90))
MNKAELIDVLTQKLG--SDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQ
General information:
TITO was launched using:
RESULT:
Template:
4DKY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7153 for 473 contacts (15.1/contact) +
2D Compatibility (PS) -9802 + (NN) -1487 + (LL) 156
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -10430.0 ( -22.05 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_4DKY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DKY-query.scw
PDB file :
Tito_Scwrl_4DKY.pdb
: