Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVITGASSGIGLECVLMLLN---QGYKVYALSR---------HATLCVALNHALCECVDIDVSDSNALKEVFLNISAKEDHCDVLINSAGYGVFGSVEDTPIEEVKKQFSVNFFALCEVVQLCLPLLKNKPYSKIFNLSSIAGRVSMLFLGHYSASKHALEAYSDALRLELKPFNVQVCLIEPGPVKSNWEKTAFENDERKDSVYALEVNAAKSFYS------GVYQKAL-NAKEVAQKIVFLSMSHKIKARYLIGLKTQLLLALYQILPSSWYDSLFRLVVLGRKRDA |
| 1QYV Chain:A ((6-265)) | --LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT-------SPEEVLDRT---DIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFT---TERFLPLLRMRLDDPSGSNYVTAMHREVF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163242 for 1830 contacts (-89.2/contact) +
2D Compatibility (PS) -24245 + (NN) -7990 + (LL) 1648
1D Compatibility (HY) -16800 + (ID) 3800
Total energy: -214429.0 ( -117.17 by residue)
QMean score : 0.519
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