Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MMKAVFINVWYLLLTIILLIIIWRIIKLVLKDKNDSGDKGLG
2L2R Chain:A ((1-37))
GSGRGSCRSQCMRRHEDE-------------PWRVQECVSQCRRRRGGGD--
General information:
TITO was launched using:
RESULT:
Template:
2L2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10334 for 123 contacts (-84.0/contact) +
2D Compatibility (PS) -3061 + (NN) -3291 + (LL) 2192
1D Compatibility (HY) 0 + (ID) 250
Total energy: -14744.0 ( -119.87 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2L2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2R-query.scw
PDB file :
Tito_Scwrl_2L2R.pdb
: