Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDP----------TAPMETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAE-TDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVESVIFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLDQKLSDQKPQKLSEQKALEQKISEQKPQEPLDQKLSDQKPQKPLEQKISEQKPLDQKLSDQKPQKPLEQKISEQKPLDQKPQTPPKETA |
2F33 Chain:A ((45-158)) | --------------QARKKA------GLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQ--QLKSCEEFMKTWRKYDTDHSGFIET-EELKNF---LKDLLEKANKTVDDT--------------------KLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAGDN--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 43782 for 630 contacts (69.5/contact) +
2D Compatibility (PS) -10827 + (NN) -5132 + (LL) 9764
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: 30687.0 ( 48.71 by residue)
QMean score : 0.343
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