Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDP-SKVLSSKENQIHRLLLELLEEAKLHFEPK-LYIINAPYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI |
| 4JEL Chain:A ((38-107)) | -------------------------------------------------------------------------------SVFLGGPFRQLVDPRTGVMSSGDQNVFSRLIE-------HFESRGTTVYNAHRREAWGAEF--------LSPAEATRLDHDEIKAADVFVAFPGVPASPGTHVEIGWASGMGKPMVLLLERDEDYAFLVTGLESQANVEILRFSGTEEIVERLDGAVARVLGR---------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JEL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17208 for 422 contacts (-40.8/contact) +
2D Compatibility (PS) -7317 + (NN) -4496 + (LL) 17056
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -17265.0 ( -40.91 by residue)
QMean score : 0.292
|
|
|