Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYH---DKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSS--TYGEIAFKYD---AQIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWES-KEKDGGASFV-INKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP |
4H5G Chain:A ((3-226)) | ---------------------SAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKNQVVGADIDMAQAIADELGVKLEILSMSFDNVLTSLQTGKADLAVAGIS-ATDERKEVFDFSIPYYENKISFLVHKAD--VEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQLTSLTNMGEAVNELQAGKIDAVHMDEPVALSY--AAKNAGLAVATVSLKMKDGDANAVALRKNSDDLKEVVDKVIQKLKDEGTYQSYLEKAASLTEV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H5G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78997 for 1740 contacts (-45.4/contact) +
2D Compatibility (PS) -23817 + (NN) -17081 + (LL) 2432
1D Compatibility (HY) -10000 + (ID) 3250
Total energy: -130713.0 ( -75.12 by residue)
QMean score : 0.498
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