Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIEAIAIK
3K0T Chain:A ((20-141))
-KTVITSDKAPAAIGPYSQAIKAGNTVYMSGQIPLDPSTMELVEG-IEAQITQVFENLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGSYFSQPYPARAAIGVAALPRGAQVEMDAILVI
General information:
TITO was launched using:
RESULT:
Template:
3K0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51960 for 912 contacts (-57.0/contact) +
2D Compatibility (PS) -12870 + (NN) -2274 + (LL) 132
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -81622.0 ( -89.50 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3K0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K0T-query.scw
PDB file :
Tito_Scwrl_3K0T.pdb
: