Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKER-YIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFL-LEKTAVKIAR-EMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGGKKYAISNGFDPMFKFEHPQKSLF--DTTPFKIAMVGRYSNEKNQSVLIKAVALSRY-KQDIVLLLKGKGPDE-------KKIKLLAQ-KLGVKTEF-GF-------VNSHELLEILKTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE-RSLFEP------------------NNAKDLSAKIDWWLENKLERERMQNEYAKSA-LNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 3OY2 Chain:A ((1-392)) | MKLIIVGAHSS-VPSGYGRVMRAIVPRISK-AHEVIVFGIHAFGRS-VHANIEEFDAQTAEHVR-GLNE--QGFYYSGLSEFID--VHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNI--------R----EN---LWWIFSHPKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISA-VGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFF-KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155231 for 2869 contacts (-54.1/contact) +
2D Compatibility (PS) -37217 + (NN) -11164 + (LL) 1864
1D Compatibility (HY) -12800 + (ID) 1800
Total energy: -216348.0 ( -75.41 by residue)
QMean score : 0.412
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