Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDTLFNESLNKRFCFDEKVAHVFDDMLERSIPYYHEMLNLGAYFIAQNLKENVYHKSLPKPLIYDLGCSTGNFFIALNQQIQQDIELVGIDNSMPMLKKAQEKLKDFNNVRFECMDFLEVKFKEASAFSLLFVLQFVRPMQ---REVLLKKIYNSLALNGVLLVGEKIMSEDRILDKQMIELYYLYKQNQGYSHNEIAFKREALENVLVPYSLKENIALLESVGFKHVEALFKWVNFTLLVARKT |
4MWZ Chain:A ((59-157)) | ---------------------------------------------------------------VLDIGSGLGGGCKYINEKYGAHVH--GVDICEKMVTIAKLRNQDKAKIEFEAKDILKKDFPE-STFDMIYSRDSILHLSYADKKMLFEKCYKWLKPNGILLITDYCADKIENWDEEFKAYIKKRKYTLMPIQEYGDLIKSCKFQNVEAKDISDYWLELLQLELSKLEEKKEEFLKVYSIKEYN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82107 for 717 contacts (-114.5/contact) +
2D Compatibility (PS) -10208 + (NN) -2857 + (LL) 5072
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -98550.0 ( -137.45 by residue)
QMean score : 0.503
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