Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQIECVEVLRCE--DFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDF--VQMTNN-HWT-FSIET-TRQCLNLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDYPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVM-KKTPGLDGAGIALENYLLHDRI |
| 3VOV Chain:A ((1-299)) | ------MKVVGLDLGGTKIAAGVFDGK-RLLSKVVVPTPKEGGERVAEALAEAAERAEREAGVRGEAIGLGTPGPLDFRRGVIR--NIPGVQDFPIRRILEEATGR-PVFLENDANAAALAEHHLGAA----------QGEESSLYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTLLPGGP--------ACGCGLEGCLEALAAGRALERDATYAFQR------------PVDTRELFRLFQ-AGDPKAERLVLQAARYVGIGLASLVKAFDPG-VVVLGGGVALNAPEGYWE-ALLEAYRRYL--Q-GWEAPPLRRARLGAEAGLLGAALTAYLEVKDG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181079 for 2578 contacts (-70.2/contact) +
2D Compatibility (PS) -29552 + (NN) -3651 + (LL) 3720
1D Compatibility (HY) 4800 + (ID) 2150
Total energy: -207912.0 ( -80.65 by residue)
QMean score : 0.293
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