Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGILTFMDFCSGIGGGRLGLERCHLKCVGHAEINHEAIRTYELFFKDTHNFGDLMRINPNDLPNFDVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIRILKVKQPKCFLLENVKGLIHHKQQETFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLK-RPFNFPLGLANDYCFKDFLDADNECYLDVSNATFQRYLRNPYNHNRVFLEDILTLENAVLDTRQSDLRLYF--------------NVFPTLRTSRHGLF-----YTQKGKIKRLNAVESLLLQGFPRDLIAKIKNNPNFKESHLLSQAGNAMSVNVIAAIAKQMLKAFNNE |
2C7O Chain:A ((12-323)) | ---LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPE-GDITQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEV-----------------EHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSAYGGGIFAKTGGYLVNGKTRKLHPRECARVMGYPDSY----KVHPSTSQAY--KQFGNSVVINVLQYIAYNIGSSLNFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155512 for 2417 contacts (-64.3/contact) +
2D Compatibility (PS) -31285 + (NN) -12367 + (LL) 2404
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -225510.0 ( -93.30 by residue)
QMean score : 0.470
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