Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFSVLTLFPQLILPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMIENALHSVKNPKH----TIFLSAVGKPFKQIDAMRLAQKKHVVLVCGRYEGFDERSIELGADEVFCIGDFILTGGELGALCLIDSIARHIQGVLGNAQSLENESFENNYLETPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS
1P9P Chain:A ((7-231))
MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLG-----------EGLLDCPHYT----RPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLAL
General information:
TITO was launched using:
RESULT:
Template:
1P9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125065 for 1499 contacts (-83.4/contact) +
2D Compatibility (PS) -22802 + (NN) -9222 + (LL) 1056
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -174833.0 ( -116.63 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1P9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9P-query.scw
PDB file :
Tito_Scwrl_1P9P.pdb
: