Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTFLIALALTASLIGAENTKWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQDKA--DLQFKYAASKPKAVFFTHHTLKASFEPT-NHINYRGH----DYVLDNVHFH------APMEFLINNKTRPLSAHFVHKDAK----GR-------LLVLAIGFEEGKENPNLDPILEGIQ------KKQNLKEVALDAFLPKSINYYHFNGSLTAPPCTEGVAWFVIEEPLEVSAKQLAEIKKRMKNS---------PNQRPVQPDYNTVIIKSSAETR |
| 4Q09 Chain:A ((5-258)) | ----------------------WGY-GKHNGPEHW---HKDFPIAK-GERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRILNNGHSFKVEFDDSQDKAVLKGGPLDGTYRLTQFHFHWGSLDGQGSEHTVDKKKYAAELHLVHWNTKYGDAGKASQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDPRGLLPESLDYWTYPGSLTTPPLNECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELMVDNWRPAQPLKNRQIKASFK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94142 for 1643 contacts (-57.3/contact) +
2D Compatibility (PS) -23026 + (NN) -5172 + (LL) 2620
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -136970.0 ( -83.37 by residue)
QMean score : 0.482
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