Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVFKRLEKLFSKIQNDKVYGVEHGVEVVKSLASAKFDETVEVALRLGVDPRHADQMVRGAVVLLHGTGKKVRVAVFAKDIKQDEAKNAGADVVGGDDLAEEIKNGRIDFDMVIATPDMMAVVG-KVGRILGPKGLMPNPKTGTVTMDIAKAVTNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGKYIRNAALSLTMSPSVNLDAQELMDIK
4QGB Chain:A ((1-215))
--------------KVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMVPSVRINPHS-----
General information:
TITO was launched using:
RESULT:
Template:
4QGB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106260 for 1781 contacts (-59.7/contact) +
2D Compatibility (PS) -23379 + (NN) -12085 + (LL) 2208
1D Compatibility (HY) -16400 + (ID) 5350
Total energy: -161266.0 ( -90.55 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_4QGB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QGB-query.scw
PDB file :
Tito_Scwrl_4QGB.pdb
: