Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVVGEIKLQIPAGKANPSPPVGPALGQRGVNIMEFCKAFNERTKDMGSFNIPVIITVYQDKSFTFITKKPPVTDLIKKASGVEKGSDNPLKNKIAKLTHKQVEEIAQLKMEDLNTSTMEAAKKIVMGSARSMGVEVVD
2E34 Chain:A ((2-139))
--KKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMGDAIVPVEITIYADRSFTFVTKTPPASYLIRKAAGLEKGAHKPGREKVGRITWEQVLEIAKQKMPDLNTTDLEAAARMIAGSARSMGVEVVG
General information:
TITO was launched using:
RESULT:
Template:
2E34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43272 for 971 contacts (-44.6/contact) +
2D Compatibility (PS) -14753 + (NN) -5612 + (LL) 352
1D Compatibility (HY) -12000 + (ID) 4250
Total energy: -79535.0 ( -81.91 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_2E34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E34-query.scw
PDB file :
Tito_Scwrl_2E34.pdb
: