Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSPNLEKEETEIIETLLVREKMRLCPLYWRILAFLIDSLLVAFLLSDLLRACAFLHSLYWLTNPIYYSAFVVMGFIILYGVYEIFFVCLCKMSLAKLVFRIKIIDIYLADCPSRAILLKRLGLKIVVFLCPFLWFVVFKNPYHRAWHEEKSKSLLVLF
4H6O Chain:A ((5-46))
--------------------------------------------------------------TPPVYPVTVPFLGHIVQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAPYPRMREQL
General information:
TITO was launched using:
RESULT:
Template:
4H6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34233 for 226 contacts (-151.5/contact) +
2D Compatibility (PS) -4131 + (NN) 2335 + (LL) 6788
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -32341.0 ( -143.10 by residue)
QMean score : 0.237
(partial model without unconserved sides chains):
PDB file :
Tito_4H6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H6O-query.scw
PDB file :
Tito_Scwrl_4H6O.pdb
: