Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAISIKSPKEIKALRKAGELTAQALALLEREVRPGVSLLELDKMAEDFI-KSSHARPAFKGLYGFPNSVCMSLNEVVIHGIPTDY-VLQEGDIIGLDLGVEVDGYYGDSALTLPIGAISPQDEKLLACSKESLMHAISSIRVGMHFKELSQILEGAITERGFVPLKGFCGHGIGKKPHEEPEIPNYLEKGVKANSGPKIKEGMVFCLEPMVCQKQGEPKILADKWSVVSVDGLNTSHHEHTIAIVGNKAVILTER
4PNC Chain:A ((2-251))-AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGQGFHEEPQVLHYDSR----ETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLR


General information:
TITO was launched using:
RESULT:

Template: 4PNC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112098 for 2156 contacts (-52.0/contact) +
2D Compatibility (PS) -27429 + (NN) -9923 + (LL) 436
1D Compatibility (HY) -18400 + (ID) 4850
Total energy: -172264.0 ( -79.90 by residue)
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_4PNC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PNC-query.scw
PDB file : Tito_Scwrl_4PNC.pdb: