Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRATAIKIFSFSSALALLLQGCLSINLKQMLPEIRTYDLNASSFEMTQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQEAQKACLGVALPPYGAGAPTYAVRFTILSFSLLEKENSTYRAEFALGYDISVKGDSHSGVIIKHENISSLENKTTKTSKNGSQDFQESAIQSLQHVSTQAMQEAISLIKKAVEAQSVSPLKK |
2AP3 Chain:A ((3-13)) | -------------MGIQRPTSTTTDKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKADNIDNDVKRKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNYKKLKEVSDKYTKVLNKVQKEKQDVD---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -693 for 29 contacts (-23.9/contact) +
2D Compatibility (PS) -979 + (NN) 1925 + (LL) 3132
1D Compatibility (HY) 2400 + (ID) 0
Total energy: 5785.0 ( 199.48 by residue)
QMean score : -0.593
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