Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTVLQIGAGGVGSVVAHKMGMNRDVFKNIILASRSLDKCHAIKESMLKKGLGEIGVEQVDADDTQALIALIQKHKPKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAGFDPGVTNAYVAHAQRHHFDTIHTLDILDCNAGDHK---RPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEE-LNTD----PFMEELIKQGLPYEVIER |
| 3ABI Chain:A ((17-364)) | -MKVLILGAGNIGRAIAWDLKDEF----DVYIGDVNNENLEKVKEF--------ATPLKVDASNFDKLVEVMK--EFELVIGALPGFLGFKSIKAAIKSKVDMVDVSFMPE---------NPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQ-ELD-LKEGYIYVGGLPKDPKPPLYYKITWSPRDLIEEYTRPARVIRNGKVSKVDPLSEVKKVKIG-K--FEFEAFISDGLRSMLETIN-SERLEEWTLRWPGHLEKIKVLRELGFFKPENLD----------FTLRVIEPLMRY--ETKDFSIMKVVGKGEE-GE-MEFFLY---DEE----DSMFSSMSRVTGFTAAIISRIVAENTCT-----FGVIPPEILGMREDTFRRIIDELKERGISIEG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ABI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186611 for 3035 contacts (-61.5/contact) +
2D Compatibility (PS) -36351 + (NN) -13499 + (LL) 3920
1D Compatibility (HY) -20800 + (ID) 2950
Total energy: -256291.0 ( -84.45 by residue)
QMean score : 0.398
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