Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFK---GYFDFWNCAIKKGYSGVVTFTKKEPLSVSYGIDIKEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALELKKP----VIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV
3W2X Chain:A ((7-258))
LKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEF---YDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQ-YTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWILSDVMGSDHCPIGLEIE
General information:
TITO was launched using:
RESULT:
Template:
3W2X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137930 for 1997 contacts (-69.1/contact) +
2D Compatibility (PS) -26716 + (NN) -13397 + (LL) 544
1D Compatibility (HY) -24800 + (ID) 5250
Total energy: -207549.0 ( -103.93 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3W2X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W2X-query.scw
PDB file :
Tito_Scwrl_3W2X.pdb
: