Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFVIERDRLVQAVNEVTRAISARTTIPILTGIKIVVNDEGVTLTGSDSDISIEAFIPLIENDEVIVEVESFGGIVLQSKYFGDIVRRLPEENVEIEVT-SNYQTNISSGQASFTLNGLDPMEYPKLPEVTDGKTIKIPINVLKNIVRQTVFAVSAIEVRPVLTGVNWIIKENKLSAVATDSHRLALREIPLETDIDEEYNIVIPGKSLSELNKLLDDASESIEMTLANNQILFKLKDLLFYSRLLEGSYPDTSRLIPTDTKSELVINSKAFLQAIDRASLLARENRNNVIKLMTLENGQVEVSSNSPEVGNVSENVFSQSFTGEEIKISFNGKYMMDALRAFEGDDIQISFSGTMRPFVLRPKDAANPNEILQLITPVRTY |
4K3L Chain:A ((1-341)) | MKFTVEREHLLKPLQQVS---------PILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEP-------GATTVPARKFFDICRGLPE-GAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSL-PSHSVIVPRKGVIELMRMLD---NPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGV-RLYVSEN-QLKITANNPE-QEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLT----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188226 for 2488 contacts (-75.7/contact) +
2D Compatibility (PS) -35587 + (NN) -12388 + (LL) 3980
1D Compatibility (HY) -28400 + (ID) 4850
Total energy: -265471.0 ( -106.70 by residue)
QMean score : 0.519
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