Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVILVPGVGKVKIEQGK
1P9K Chain:A ((16-77))
------GKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHS-VQV----
General information:
TITO was launched using:
RESULT:
Template:
1P9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33609 for 430 contacts (-78.2/contact) +
2D Compatibility (PS) -6665 + (NN) -2006 + (LL) 912
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -43668.0 ( -101.55 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_1P9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9K-query.scw
PDB file :
Tito_Scwrl_1P9K.pdb
: