Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKITIQEIAKLSGVSVSTVSRVLNNSPSVSAAKRKKIQAIIDEHNYTPSVFARGMVNKQTKNIGVILPDISNPYFISLITQIQKFALDYMFSTILFNTMLAEPDNKNNQHPLTEEDYLKIILEKQVDGLLILGGEIDKEIVPKEYITALNQLNNAIPVVVI--GSKIPELNCLFIERNLKKGVTTLVSHLTALGHKNIGFIGGEAGVKITTYRLESFKEAMTSYQHPVNDDWVVLSDYYTADGYAAMTHLLENSTTLPTALVAINDNVAIGAIRAINDAKLSCPEDIAIVSCDQFMNGDYQTPRLTSMDQHNEYLGKMAILQLISAI-NGQVEPMIINHNPELIIRESCGSKL
1PNR Chain:A ((2-329))----TIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAW----NNLEKQRA-----YLSMMAQKRVDGLLVMCSE-----YPEPLLAMLEEYRH-IPMVVMDWGEAKADFTDAVID-NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQIL-SQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRS-----


General information:
TITO was launched using:
RESULT:

Template: 1PNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -250086 for 2718 contacts (-92.0/contact) +
2D Compatibility (PS) -35637 + (NN) -16787 + (LL) 2128
1D Compatibility (HY) -19200 + (ID) 5350
Total energy: -324932.0 ( -119.55 by residue)
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_1PNR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PNR-query.scw
PDB file : Tito_Scwrl_1PNR.pdb: