Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFVILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFG------KHTTCHADIIAE-HDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE-----------ETLRMRLLEEGEWGLDFILKTRFGD-GFRATSAGMTRWTDGLVGGMDDAIARV--HNQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKILK-DKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSV--LNGE-----ITGEIPVGMETF------------RNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 3GZK Chain:A ((7-537)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSIFYNQVGYLISGDKRFWIQAHE-PQPFALRT-PEGQAVFAGMTKPVG---GNWYVGDFTALRVPGTYTLTVGTL-EARVVIHR--RAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP-FHNPDGILTGEYGD--AELRDELLWASCALLRMTGDSAWARVCEPLLDL------D----------LPWELGWADVALYGVMDYLRTPRA-------------AVSDDVRNKVKSRLLRELDALAAMAE-SHPFGIPMR----------------------------------------DDDF-----IW----GSNMVLLNRAMAFLLAEGVGVLHPAAHTVAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVADDVDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEARGR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129142 for 4416 contacts (-29.2/contact) +
2D Compatibility (PS) -52318 + (NN) -22672 + (LL) 19680
1D Compatibility (HY) -10400 + (ID) 4500
Total energy: -199352.0 ( -45.14 by residue)
QMean score : 0.382
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