Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITIIAAFFLLVNNVLLQPENGLLKFIPNVENYLGVGIQVYNATLGIMAILAAFLIGNFLAKSYGMEGRTEGVIAVAAY--VVLIPASSHLMSVDGKAFEAGGVLTQEMTSSTGMFLAIIAALVSITMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVLVVSFVSMSIPEII-VKVLQIPLVGGFQTLP----GILLYVFL--AGFLWVFGIHGAFVLGAISGPVLLTSLQQN-IDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDH-RMVTKFGLIPSIFNVSEPLMFGLPVVFNPIYGIPLVIAPLASTAMAYFATSWGWISQTYILIPWVTPPVLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAVTNGEV |
| 1XIP Chain:A ((1-381)) | ASSLKDEVPTETSED---FGFKFLGQKQILP---SFNEKLP-------FASLQNLDIS--NSKSLFVAASGS---------KAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNNTLVILN-----SVNDLSALDLRTKSTKQLAQN----VTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG-------NVISETDDEVSYDQKMYIIKHIDG------SASFQETFDITPPFGQIV-----------RFPYMYKVTLSGLIEPDANVN--VLASSCSSEVSIWDSKQVIEPSQDSERAVLPIS------------------------EETDKDTNPIGVAVDVVTSG--LPLVYILNNE--------GSLQIVGLFH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -323087 for 2880 contacts (-112.2/contact) +
2D Compatibility (PS) -36801 + (NN) 9908 + (LL) 9260
1D Compatibility (HY) 0 + (ID) 2100
Total energy: -342820.0 ( -119.03 by residue)
QMean score : 0.094
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