Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLVVFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPEDSWFGKLINKEKMEKAEAFFNKHGGKT-IFIARFMPFIRTFAPFVAGASRMNYRYFLNYNILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSAE |
1X93 Chain:A ((31-73)) | ------------------------------------------------------------------------------------------------------TRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIE--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X93.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10161 for 181 contacts (-56.1/contact) +
2D Compatibility (PS) -4783 + (NN) -3707 + (LL) 15224
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -4927.0 ( -27.22 by residue)
QMean score : 0.099
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