Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISNDNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAG-DVTSWKIERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD |
3DB7 Chain:A ((15-68)) | -------------------------------------------------------------------------------------------------------------------------------------------------QLAQQFIKQHFSDSKVALAKMESDFLYKSYEVIFTNG---NKVEFDK-KGNWEEVDCK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1814 for 306 contacts (-5.9/contact) +
2D Compatibility (PS) -5673 + (NN) 311 + (LL) 6260
1D Compatibility (HY) -800 + (ID) 350
Total energy: -2066.0 ( -6.75 by residue)
QMean score : 0.359
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