Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNVKIDAAKVAEAKKSAAIVEKSLESTHKKCKSVISYVEGASWSGKSRDAFLTFMELIEKYHADVKKNYKKQKKALTALEDYVEDFENTSYSKDVKRL
3OGI Chain:A ((13-69))
-------------HGAMIRAQAGLLEAEHQAIVRDVLAAG----------ACQEFITQLGRNFQVIYEQAN----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3814 for 216 contacts (-17.7/contact) +
2D Compatibility (PS) -4933 + (NN) -2644 + (LL) 3088
1D Compatibility (HY) 1200 + (ID) 150
Total energy: -7253.0 ( -33.58 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_3OGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OGI-query.scw
PDB file :
Tito_Scwrl_3OGI.pdb
: