Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
| 2L96 Chain:X ((1-24)) | -------------------------------------------------------------------------------------------------------------------------------------------------------KKLKLAPAKLALLWKALALKLKKA----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4051 for 85 contacts (47.7/contact) +
2D Compatibility (PS) -2638 + (NN) -2298 + (LL) 23176
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 20791.0 ( 244.60 by residue)
QMean score : 0.466
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