Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKLPPEADYLNDETLEVYENDKKKYDQTNQLITNNSVTILLGDFCYYESAWSSRWRDNRFWIGSKVS
2AAK Chain:A ((116-148))
---PNPNSPANSEAARMYSESKREYNRRVRDVVEQS-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10555 for 160 contacts (66.0/contact) +
2D Compatibility (PS) -3700 + (NN) -2866 + (LL) 2496
1D Compatibility (HY) 0 + (ID) 350
Total energy: 6135.0 ( 38.34 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_2AAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AAK-query.scw
PDB file :
Tito_Scwrl_2AAK.pdb
: