Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKTIVDTLIAQRRDRKIKESERRQENYRAKRENLTEVYRSLILIVNLFPNESPTDIIKNIKYGPYYSLENYNGIFRTLDYKIEDYEKRKSFSNLDYEEKNDIDIEISNIEYAKDKLARNRKSYQKAVKCFNQFKDSDKAIFDLYAGTHVQNCLVNFEITINNVFISGMSVGIPDSPYENSIKIASRKLISAMKKDIGIT |
| 2PNV Chain:A ((488-526)) | ---NIMYDMISDLNERS-EDFEKRIVTLETKLETLIGSIHALP------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6401 for 148 contacts (43.2/contact) +
2D Compatibility (PS) -4356 + (NN) -1465 + (LL) 10112
1D Compatibility (HY) -2400 + (ID) 450
Total energy: 7842.0 ( 52.99 by residue)
QMean score : 0.580
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