Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQNEANIMAQFASA----DAEQAERIFERLNKRKQTESRRSNDK
2W6J Chain:H ((39-146))
-SFTFASPTQVFFN----QVDVPT-----------------LRPGLVVV---------FVSSGS--------QLLAEEAVTLDMLDLGAAKANLEKAQSELLGAAD-----
General information:
TITO was launched using:
RESULT:
Template:
2W6J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40035 for 310 contacts (-129.1/contact) +
2D Compatibility (PS) -6580 + (NN) 98 + (LL) 3204
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -45963.0 ( -148.27 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_2W6J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W6J-query.scw
PDB file :
Tito_Scwrl_2W6J.pdb
: